CDS
| Accession Number | TCMCG015C13917 |
| gbkey | CDS |
| Protein Id | XP_027111529.1 |
| Location | join(9093608..9094312,9095595..9096090,9097130..9097281,9097407..9100757,9100971..9101183,9101470..9101673,9101843..9102046,9102945..9103103,9103639..9103989,9105813..9106172) |
| Gene | LOC113730798 |
| GeneID | 113730798 |
| Organism | Coffea arabica |
Protein
| Length | 2064aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027255728.1 |
| Definition | uncharacterized protein LOC113730798 isoform X3 [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Ribosome 60S biogenesis N-terminal |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K07766
[VIEW IN KEGG] ko:K14861 [VIEW IN KEGG] |
| EC |
3.6.1.52
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGTCCTCAGTTGGTGATGGATTTACATGTGCCTATGTTAACTCTCAGTCTCAGGAGCCCCCATCCATTGACAATCTGATAGTCCAAGACATTATGAAGTGCATAGGGCCACGCCCATTCACCCGATTGGTAATGAATAAAGGGTTGCTTCACTCTGATCCTCTTGTGAAACATGTAACTCTGAGGCTTGTATCGGAGGAACTAAAGCTTCTCGACTTTTTAATTGGCTCTGTAAATGATCTGTCCAGTTCCAGTGATCAAGTGATGCATAAGTGGGCATCTTTCAAGCGAGATGTTCAGAATGTAGTCCAGATTTTACTTCCTGATCCCCAGGTGCTATTATCACTACTTTCTTCACTCAGTGGCTACTGCAAGAGTCCTGCATCAAGAATGAAGAGGGCTGCAGATGTAGATGTTACAGTCGAGCATAATTTGCACAAGAAGAAGAAGTTGAAGATGAATAGCGTGGATGAGGACATGGATATTCTCGTCAGTGGGGTTAGTTCAACCACTGAAGGGGCTTTGACTGAGAATGATGGAGTGTCAGAAGAGGATGTTGAGGATCAGCTGAATAGTGGAGTTGACCTCCTGAAACCTGTTCTAGAAATTTGGGGTTTGCAGGGATGCTCCAGTGTAGATATCAGAACTGAAGATGGGGACACATACTTTTACTCAAAGTTGCTTGATGTTCTCAGAATTTATCATCGGACTCTGCCTACTGCTGTGGAAGGATCATTTGACTTCTTTAAAGTTCTCCCAAGCAATCCTTTAGCACTACCTACAATTTTGCAGCAGTCTATGCTGTCACTGCTTGTAGAACAAGTTGTTGGGTCCAACAAGTCTCAGATTTCCATCAGAACCCAACCATTGATGTACAAGTATCTTCATTCATTTATCAATTTGTTTATGTATTCACCAATAAGAGACATAAAAGATCAGGCTTACTCTTTAGCACAAGCAGCCATGTTGAGTACAGGTGCATTTGACAGAAATCCAAGGGAAATTTCTGCTTGGTTTCTATTTATACCTGGCTATACCAGTGTGGTTATTGATGGTCAAAAACATGGGATTGAAGTATTCCAAAAGTTGTCTTCAGTTGTCATCTCTTTTCTTTGCGATGCAGTTTCTACTACTGGGAACAACTTGTTCAAATATTTGGATCTCTTAAGGGGCTATATCCGTGATTTAGAGGTTTCTACAGATACATTTCCCAATTTTAGCCCTTTCATAGTTTGTGTACTGGAGAAGTGCTTGAGGTTACTTAGCTCTGAAACTGGTTCTTTTACATTGCCCGAGAAGTCAATGATATCATTGTATGTTTCTACCACATTAAAGTATCTCCTGGAAACTCAGGTTGAAGGTGGACTTTTGTGTTCCCTGACGCAGCTTTTGATATCAGAGAGACTTAAAGGTTGTTGCGATATGATTGGATTCTGCCCTTGTGAATGGATGCCGATGAATAGTTTGTTATATTTTGCAAGGAATACCGTGCAGCAACAAATTTATAGCAGTTTTATGTCTGAAGAGAAAGCTACTGGTCTTGGTGGTTCATTTTCTGAGACACTTTCTGAAGTTAATAGGATTTTAAGGACTAAGGATCATTGTGGGTTGCTTGGAGTTACTATGGGGTTTTCTTTTTCAATGATATGCACCACAGCTGATCAGATATTGCAGAATTTCCCATCGACCATCTCTACTTCTACTAAATTGCTTGGGGTTCCTTTCTCAATTTTGTTGTTGAGATTCTTTCTCGAACCAAGTCATTTTGCTGAAGTTTTCAAGTTATGGCCTAAAATATGCTTTGCTGGAGTTGACAAAGTTATAAGTGGAGTTCATGATGGAGAAGGGCAGACAATAGCTAATGAGCTTGATGATTCACCAGATTCTGCTTCTATTGCATTCTCTTTTTTAGTAAAGAATGCTCCTTTTCATGTGCTCTTTCCAGCTATTTTTTTCACTGATGGATTGCATTTGCTTGGTCACTCAAAAGTGCAGAATTTGCTTCTGGATAAATTCACTGAGAGTACACCTGACTTCTCTGTCTCTTCTCTCTGCCGTCTTCTCTTTTGCTTGCTTCAAGCGCGATTGGCCTATAGAATCAAACCATCTGATGAACTTGAAAAACTTTGTGAATCATCTTGTTTTCTTGCAAAGCACATAGTAAAACAATCATTTGTTGAAAAATTTGGTCCTGATTGCTCCCCGCGTGTTTTGCCTCCTTTATCATCTGGTCATATTCGAGAAGTGGCTGAAATAATTCTTGGCCACCCTTTACTCACTGCATTGCTGGAATGGCCTTTGCATACCGATAATGATGTTGGTGACATGATTTTTATGAAACCTCCAGAAACCTTTCTTCAGTATGCTGAACGGGGTGTTCGTAAAATAGATCATCATATTTTGCAGTTGTTAAGAAGAACCACATCTGAGCTTTTGGTTCATGTATTTAGTAAATGTAGATCACCATCTGTGGTTGATCATTCTACTGAACGGATTGCAAAGGCTTTCAAGGCTCTGGTGCAGAAGCTATTTTTGACATTTAAGGCGAGGTTCACAGATTCCAGAAAGACAGATGATTTGATGCCTCTAATTCCTACATTGTATGCTTTGCATAGTCTGAGTGAATTCATATGTCCCTTTGAGTTGCTCAATTTGGTGCACTGGTTGTTCTCCAGAATTGATCTAAATGATACTGCAGTTTCCATTTCTTGTCAAAGATGTGGTTTGTCTGTTGGATTACAAATTGCTTCATGGGCTTTTGATTCTCTTTCTTTATATATGTTAGAGCCACATGCAAAGAGGACATTATTCAATTTCTTTATGGGTACTGGAAACAGAAGTTTTGAAATTACCCTTTTTGAGAGAATTTTTAACAGCATATTTGAGATTGCCACTCACACTCAACTAGAAGTTGCTGATATATGTTTATTCAAAGCTGTTAAGATCATCAAAATGCATAAATGTATGGAGAAGACCAGCTTACCTTTTGTTATGGCTACTTCAAGACTTCTACCCAGTGTTCCTGTGAACTTTATTTCTTATTGCTTGGACAAGACAACCAAGACTAAGTGTGACTTCTTGTTTCTTCTGTCTGAGATGAGCTCCCTGCATCTTTGTGTATTTGGACATTTGGTTTCTGGTAAAATTAGTAATAATCAAGCTCTTAAGGTCAACAAGGAAGAAAACTGCAATCGGCCTCAGTACTCTGAAGAGTTCTTGATGCTTCTGCCAACTGTTCTGTTATACTTGAGGTCAAATTTTCTGAAATTTGGGGGCCAATTTGGCAAGCATGTTGAAAACACTTCTTCTTTCTTTTGGAAGATCCTTTTGCGTGGTTTCTCTAACTGGAAGAGTTTTGTTTCGGAAGAGATATTTGAGATAAAACTTGTTGAGTGCTCATCTTTATGCATGGAAGATTTTTCTAACCTTTTCTCTTCCAGTCTTCTTGGAAAAGCAGTACTGCTGATGCGTCATTACCTTGCTGTGAGTGGACACTTGGTGAAAATGAAAAGGCTATTGAGTACATTTGATTCTGTTTGCCCACATGCGAGTGCACAGAATGATCTTCTGGACTGCGATGCTAGAGAAATTGGTGTTTGTTCTCTTGAGTTGTCTTTGAACTTTGTGAACAAAATTATTGCAAAGATATGCCTCTGTTGGATGTTGTTATTTCCAGAGCATAATAATCTTCAATCTGTAGTGAAAGATGGAAAGAAAAAAGGAATTGAATCAGAAGTTAGCATTTTGAGAATCCGATTTTTAAGTATGCTGGTCCATTCATGGCAACGTCTTGTGGAGAATTTTCATACATGCAGGCAAGGAGAGAACATAAGGTCGTCATTGTTTAGATTCTTGGAGATCTTCATTGCTAAGAATATAGTAGCATTGGTAAGAGAAATGCATGATTGCCTGGTTGAATTGCATTCGCTTCCTTTCTTAGACCAACTTGCCAAATATTCTCTTCTTCATAGGTTTGATGACCCTACCACAATTAGGATGCTTAGAATTGTTCTTATTTCACTATCTGAGGGAAAGTTCTTGTGCATTTCAATTCTCCAGCTGTTACTTGCTCACTCTCAATTTGCTCCAACCATTCTATTTGCCCATTCATCAACTGTTTGTACTCAATTTGGTATGAGTTTTGCTCCGGCACCCAGCATTATGAGGTTATTTACTGTTCTTCATACTGAAGAAAACACGGTTGATGGAAAAAAGGATGCTCATGAAACTGGGCCTCACATGAAGAAGTTGGAACTGATTAAGTTGCTCAGAGTACTAATACATATCTTGGGTCAGCAACATTATCTTGATTCTGAAACATCCAATGGCTTAAATTTGAAGGAATTGGTTTTGGTGCTTTTGTCTTCTTATGGAGCAACCATGGATGAGATTGATTTGGAAATGTATAGCCTCATGAATGAAATTGAGGCTATTGATAAATCAGTCTCTGAAGGTATTGCTGAAATGGATTTTCTATGGGGCTCTGCTTCTCTGAAGGTGAGACAAGAAAGGGAACAAAAGCAAAGTGTATCTTCTTTGAGTAACTCATATGATAATGAAGTAGTTGGAGAGAGACGAAGGATTCAATTTAGAGAAAATCTTCCCATTGACACCAAATTATGTGCAATGACAGTCCTTTGTTTTCCTCATGATAGATTTGCTGATGGGAGCTTGAGCAAGCTCCAAACAAATGATTCTGATGAGGGCTACAATGCAAATTCTAAGAAGGTGCAACTTTATGATCCAGTTTTCATCTTGCGTTTTTCAATTCACAGTCTTGCAATGGAGTATATTGAGCCCCTGGAGTTTGCTAGTTTGGGTTTGCTTGCAATTACATTTATCAGTTTGTCTTCTCCTGATGCTGATACAAGGAAATTGGGCTATGAGGCTGTTGTGAGATTTAAGAGTGCTGTGGAGAAATGTCGCAAGAGGAAGGATGTGATGCGACTCCGGCTCTTAGTATCATACTTGCAAAATGGTATAGAAGAAGAGTGTCAGAGGATTCCTTCCATAACTGCTGTATTCATTGCGGAAGCTTCTTTTGTTCTGTTAGATTCTTCCCATGATCATTATTCAGCTATAAGTAAATGCCTGATGCAGTCATCAGGTGCTAATATGAAGGGTGTACCATTATTCCAAGAATTCTTCTGGAGTAGCTCTGTTACTTTTAAGTCGGAAAGGTTGTGGATGCTTCAGCTTTTAAACACATCTCTGACTATGGATGATGATGCTCAAATACTTGTCAGAAATTCCATTTATGAGATCCTTTTAAATTTTTATGCCTCTCCTCTTTCCGATGACGAGTCAAAGGAACTGATCGTTGAGATGGTGAAAAAGTCCGTCAAAATAAATAAGCTTGCATGGCATTTGGTTGTACGCTGTGGCATAATTTCTTGGCTGTCTTCTCATGTTGCATCTTTTTACGGGATTCTACTCAGGGACCAGAGAAGTTTTTCATTTGCTAAGTTAGCTATGGTTCTGGAGGTAGCCAATGATGTTATTATGTCTAGAAATACTAGTGAGTGGTTGCAAAAATATGCCCTAGAGCAGCTTTCTGAACTTGCAGCTCATCTGTACAGAATCTTAGTTGGTTGTTCTAAACATATACAAGAGAAAACCAGAATCATTGATTTGATTCTAGAACTATTGATGTCAACCCTGAAGATCTCACAGAAAAGAAAAGTATATCAGCCGCATTTTACAATATCTTTTGAAGGTTTATACCATTTGTACGAAGCTGTTGATGTCTGTTGCAGTGGGACCTTCAGTTCTACTGCTGAGATTGGACTGAAAGCTGTCCTTATGAGTACTCCTCCAGTTTCTATACTTCACATGGATAAAAATAAGCTTTTGAAGTTTGTTAGCTGGGCAATATCAACTGCTGTGCAGTCAAACTTGATGGAGGTGCCTGAATCTGAAGCAATGTATAGCAATGCCTTGAGATTTTCAGAACAATCTGAAGAGGATCTTGTATCAAAGCTTTTAAGATGGCTGACTGCCTCAGTGATTCTTGGAAGGCTTTCATGGAAATTGAGTGATTTGAATTCCACTAGTTCTTCTGAAATATTAAAGCTTGATAATCTGCATTGTATCATGGACTATTGTGTGAAGGAATGTGGAGAAAACCAGGAGAATTTTGGCAGCAAAGAGATACTAGCTGTATCAATTTTTACCTACAGCAGCTTGCAGGCATAA |
| Protein: MSSVGDGFTCAYVNSQSQEPPSIDNLIVQDIMKCIGPRPFTRLVMNKGLLHSDPLVKHVTLRLVSEELKLLDFLIGSVNDLSSSSDQVMHKWASFKRDVQNVVQILLPDPQVLLSLLSSLSGYCKSPASRMKRAADVDVTVEHNLHKKKKLKMNSVDEDMDILVSGVSSTTEGALTENDGVSEEDVEDQLNSGVDLLKPVLEIWGLQGCSSVDIRTEDGDTYFYSKLLDVLRIYHRTLPTAVEGSFDFFKVLPSNPLALPTILQQSMLSLLVEQVVGSNKSQISIRTQPLMYKYLHSFINLFMYSPIRDIKDQAYSLAQAAMLSTGAFDRNPREISAWFLFIPGYTSVVIDGQKHGIEVFQKLSSVVISFLCDAVSTTGNNLFKYLDLLRGYIRDLEVSTDTFPNFSPFIVCVLEKCLRLLSSETGSFTLPEKSMISLYVSTTLKYLLETQVEGGLLCSLTQLLISERLKGCCDMIGFCPCEWMPMNSLLYFARNTVQQQIYSSFMSEEKATGLGGSFSETLSEVNRILRTKDHCGLLGVTMGFSFSMICTTADQILQNFPSTISTSTKLLGVPFSILLLRFFLEPSHFAEVFKLWPKICFAGVDKVISGVHDGEGQTIANELDDSPDSASIAFSFLVKNAPFHVLFPAIFFTDGLHLLGHSKVQNLLLDKFTESTPDFSVSSLCRLLFCLLQARLAYRIKPSDELEKLCESSCFLAKHIVKQSFVEKFGPDCSPRVLPPLSSGHIREVAEIILGHPLLTALLEWPLHTDNDVGDMIFMKPPETFLQYAERGVRKIDHHILQLLRRTTSELLVHVFSKCRSPSVVDHSTERIAKAFKALVQKLFLTFKARFTDSRKTDDLMPLIPTLYALHSLSEFICPFELLNLVHWLFSRIDLNDTAVSISCQRCGLSVGLQIASWAFDSLSLYMLEPHAKRTLFNFFMGTGNRSFEITLFERIFNSIFEIATHTQLEVADICLFKAVKIIKMHKCMEKTSLPFVMATSRLLPSVPVNFISYCLDKTTKTKCDFLFLLSEMSSLHLCVFGHLVSGKISNNQALKVNKEENCNRPQYSEEFLMLLPTVLLYLRSNFLKFGGQFGKHVENTSSFFWKILLRGFSNWKSFVSEEIFEIKLVECSSLCMEDFSNLFSSSLLGKAVLLMRHYLAVSGHLVKMKRLLSTFDSVCPHASAQNDLLDCDAREIGVCSLELSLNFVNKIIAKICLCWMLLFPEHNNLQSVVKDGKKKGIESEVSILRIRFLSMLVHSWQRLVENFHTCRQGENIRSSLFRFLEIFIAKNIVALVREMHDCLVELHSLPFLDQLAKYSLLHRFDDPTTIRMLRIVLISLSEGKFLCISILQLLLAHSQFAPTILFAHSSTVCTQFGMSFAPAPSIMRLFTVLHTEENTVDGKKDAHETGPHMKKLELIKLLRVLIHILGQQHYLDSETSNGLNLKELVLVLLSSYGATMDEIDLEMYSLMNEIEAIDKSVSEGIAEMDFLWGSASLKVRQEREQKQSVSSLSNSYDNEVVGERRRIQFRENLPIDTKLCAMTVLCFPHDRFADGSLSKLQTNDSDEGYNANSKKVQLYDPVFILRFSIHSLAMEYIEPLEFASLGLLAITFISLSSPDADTRKLGYEAVVRFKSAVEKCRKRKDVMRLRLLVSYLQNGIEEECQRIPSITAVFIAEASFVLLDSSHDHYSAISKCLMQSSGANMKGVPLFQEFFWSSSVTFKSERLWMLQLLNTSLTMDDDAQILVRNSIYEILLNFYASPLSDDESKELIVEMVKKSVKINKLAWHLVVRCGIISWLSSHVASFYGILLRDQRSFSFAKLAMVLEVANDVIMSRNTSEWLQKYALEQLSELAAHLYRILVGCSKHIQEKTRIIDLILELLMSTLKISQKRKVYQPHFTISFEGLYHLYEAVDVCCSGTFSSTAEIGLKAVLMSTPPVSILHMDKNKLLKFVSWAISTAVQSNLMEVPESEAMYSNALRFSEQSEEDLVSKLLRWLTASVILGRLSWKLSDLNSTSSSEILKLDNLHCIMDYCVKECGENQENFGSKEILAVSIFTYSSLQA |